Phone: 886-3-2118800 ext.3727
Fax: 886-3-2118700
E-mail: g39002007@mail.cgu.edu.tw
Education
Ph.D. Institute of Molecular Medicine, College of Medicine, National Taiwan University.
M.S., Institute of Microbiology and Immunology, School of Life Science, National Yang-Ming University.
B.S., Department of Life Sciences, National Tsing Hua University.
Research experience
Principal Investigator Phase
Aug. 2022-Present:
Assistant Professor, International Master Degree Program for Molecular Medicine in Emerging Viral Infections, Chang Gung University.
Aug. 2021-Jul. 2022:
Assistant Professor, Graduate Program in Molecular Medicine for Master's Degree, Chang Gung University.
Feb. 2021-Jul. 2021:
Assistant Professor, Research Center for Emerging Viral Infections, Chang Gung University.
Aug. 2017-Jan. 2021:
Assistant Research Fellow, Research Center for Emerging Viral Infections, Chang Gung University.
Research interests
- Cutting-edge Exploration: Investigating the Molecular Virology of RNA viruses, including enterovirus, influenza virus, and coronavirus to understand the intricacies of their biology and potential therapeutic targets.
- Temporal Insight: Utilizing advanced RNA-based methodologies to unravel the spatiotemporal dynamics of RNA virus replication, providing a deeper understanding of viral life cycles.
- Pathogen Pioneering: Employing state-of-the-art sequencing techniques for the identification and molecular diagnosis of novel and clinical pathogens, contributing to the advancement of disease detection and control.
- RNA Unveiled: Exploring the application of ONT-nanopore sequencing to decipher RNA modifications and unveil secondary structures of RNA viruses, offering key insights into their function and evolution.
Grant and Award:
Grants:
- National Science and Technology Council (NSTC 112-2320-B-182-043-MY3), 2023.
- National Science and Technology Council (NSTC 109-2320-B-182-045-MY2), 2020.
- National Science Council Undergraduate Monographic Study Support (NSC 89-2815-C-001-032R-B), 2000.
Awards:
- 2010 First Research Competition (Travel Award for International Conference) of Institute of Biomedical Sciences, Academia Sinica.
- 2013 First Research Competition (Travel Award for International Conference) of Institute of Biomedical Sciences, Academia Sinica.
- Poster Presentation Award at the 2014 Academia Sinica Mini Symposium on RNA Biology, Academia Sinica.
Publications (Last 5 Years, * corresponding)
- Guan-Hong Wu, Kuo-Ming Lee, Chia-Yu Kao, Shin-Ru Shih* (2023, Jun). The internal ribosome entry site determines the neurotropic potential of enterovirus A71. Microbes Infect. 25:105107.
- Pei-Lan Shao, Hsiao-Chen Tu, Yu-Nong Gong, Hung-Yu Shu, Ralph Kirby, Li-Yun Hsu, Hui-Yee Yeo, Han-Yueh Kuo, Yi-Chia Huang, Yung-Feng Lin, Hui-Ying Weng, Yueh-Lin Wu, Chien-Chih Chen, Tzen-Wen Chen, Kuo-Ming Lee, Chung-Guei Huang, Shin-Ru Shih, Wei J Chen, Chen-Chi Wu, Chong-Jen Yu*, Shih-Feng Tsai* (2023, Apr). Emergence and Persistent Dominance of SARS-CoV-2 Omicron BA.2.3.7 Variant, Taiwan. Emerg Infect Dis. 29:792-796.
- Yi-Ju Han, Kuo-Ming Lee, Guan-Hong Wu, Yu-Nong Gong, Avijit Dutta, Shin-Ru Shih* (2023 Feb). Targeting influenza A virus by splicing inhibitor herboxidiene reveals the importance of subtype-specific signatures around splice sites. J Biomed Sci. 30:10.
- Kuo-Ming Lee, Syh-Jae Lin, Chung-Jung Wu, Rei-Lin Kuo* (2023 Feb). Race with virus evolution: The development and application of mRNA vaccines against SARS-CoV-2. Biomed J. 46:70-80.
- Yu-An Kung#, Kuo-Ming Lee#, Huan-Jung Chiang#, Sheng-Yu Huang, Chung-Jung Wu, Shin-Ru Shih* (2022, Jun). Molecular Virology of SARS-CoV-2 and Related Coronaviruses. Microbiol Mol Biol Rev, 86(2):e0002621. # equal contribution.
- Yu-Nong Gong, Kuo-Ming Lee, Shin-Ru Shih* (2022). Evolution and Epidemiology of SARS-CoV-2 Virus. Methods Mol Biol, 2452:3-18.
- Richard Janissen, Andrew Woodman, Djoshkun Shengjuler, Thomas Vallet, Kuo-Ming Lee, Louis Kuijpers, Ibrahim M Moustafa, Fiona Fitzgerald, Peng-Nien Huang, Angela L Perkins, Daniel A Harki, Jamie J Arnold, Belén Solano, Shin-Ru Shih, Marco Vignuzzi, Craig E Cameron, Nynke H Dekker (2021, Nov). Induced intra- and intermolecular template switching as a therapeutic mechanism against RNA viruses. Mol Cell, 81(21), 4467-4480.
- Sheng-Yu Huang, Yu-An Kung, Peng-Nien Huang, Sheng-Yun Chang, Yu-Nong Gong, Yi-Ju Han, Huan-Jung Chiang, Kuan-Ting Liu, Kuo-Ming Lee, Chia-Yu Chang, Chia-Ching Chang, Chung-Guei Huang, Shin-Ru Shih* (2021 Mar). Stability of SARS-CoV-2 Spike G614 Variant Surpasses That of the D614 Variant after Cold Storage. mSphere, 6(2), e00104-21.
- Yu-Nong Gong, Kuo-Chien Tsao, Mei-Jen Hsiao, Chung-Guei Huang, Peng-Nien Huang, Po-Wei Huang, Kuo-Ming Lee, Yi-Chun Liu, Shu-Li Yang, Rei-Lin Kuo, Kuan-Fu Chen, Yen-Chin Liu, Sheng-Yu Huang, Hsing-I Huang, Ming-Tsan Liu, Ji-Rong Yang, Cheng-Hsun Chiu, Cheng-Ta Yang, Guang-Wu Chen, Shin-Ru Shih* (2020 Dec). SARS-CoV-2 genomic surveillance in Taiwan revealed novel ORF8-deletion mutant and clade possibly associated with infections in Middle East. Emerging Microbes & Infections, 9(1), 1457-1466.
- Chung-Guei Huang#, Kuo-Ming Lee#, Mei-Jen Hsiao, Shu-Li Yang, Peng-Nien Huang, Yu-Nong Gong, Tzu-Hsuan Hsieh, Po-Wei Huang, Ya-Jhu Lin, Yi-Chun Liu, Kuo-Chien Tsao, Shin-Ru Shih* (2020, Jul). Culture-Based Virus Isolation To Evaluate Potential Infectivity of Clinical Specimens Tested for COVID-19. Journal of Clinical Microbiology, 58(8), e01068-20). # equal contribution.
- Bo-Shiun Chen, Hou-Chen Lee, Kuo-Ming Lee, Yu-Nong Gong and Shin-Ru Shih* (2020, Feb). Enterovirus and Encephalitis. Frontiers in Microbiology, 11, 261.
- Kuo-Ming Lee, Chih-Ching Wu, Shang-En Wu, Ya-Han Lin, Li-Ting Wang, Chun-Ru Chang, Peng-Nien Huang, Shin-Ru Shih, Rei-Lin Kuo* (2020, Apr). The RNA-dependent RNA polymerase of enterovirus A71 associates with ribosomal proteins and positively regulates protein translation. RNA Biology, 17(4), 608-622.
- Kuo-Ming Lee, Yu-Nong Gong, Shin-Ru Shih* (2020, Nov). Methods for detection and study of virus-derived small RNAs produced from the intramolecular base-pairing region of the picornavirus genome. Methods, 183,4-12.
- Tzu-Wei Chuang, Chia-Chen Lu, Chun-Hao Su, Pei-Yu Wu, Sarasvathi Easwvaran, Chi-Chieh Lee, Hung-Che Kuo, Kuan-Yang Hung, Kuo-Ming Lee, Ching-Yen Tsai, Woan-Yuh Tarn* (2019, Mar). The RNA Processing Factor Y14 Participates in DNA Damage Response and Repair. iScience, 13, 402-415 (SCIE: 4.447, 15/71, Multidisciplinary Sciences)
- Andrew Woodman, Kuo-Ming Lee, Richard Janissen, Yu-Nong Gong, Nynke H. Dekker, Shin-Ru Shih, Craig E. Cameron* (2019, Feb). Predicting Intraserotypic Recombination in Enterovirus 71. Journal of Virology, 93(4), e02057-18.
- Kuo-Ming Lee, Yu-Nong Gong, Tzu-Hsuan Hsieh, Andrew Woodman, Nynke H. Dekker, Craig E. Cameron, Shin-Ru Shih* (2018, Jun). Discovery of Enterovirus A71-like nonstructural genomes in recent circulating viruses of the Enterovirus A species. Emerging Microbes & Infections, 7(1),111.
- Kuo-Ming Lee, Chi-Jene Chen, and Shin-Ru Shih* (2017, Jul). Regulation Mechanisms of Viral IRES-Driven Translation. Trends in Microbiology, 25(7), 546-561.
Database (* corresponding)
Lee, K.-M., Tarn, W.-Y.* (2012) THRAP3/TRAP150 in Atlas of Genetics and Cytogenetics in Oncology and Haematology (a structured review; http://atlasgeneticsoncology.org/Genes/THRAP3ID42960ch1p34.html).